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Tick tock, tick tock: Mouse culture and tissue aging captured by an epigenetic clock
Aging Cell. 2022 Feb 1;e13553. doi: 10.1111/acel.13553.
Christopher Minteer 1, Marco Morselli 2, Margarita Meer 1, Jian Cao 1 3, Albert Higgins-Chen 1, Sabine M Lang 1, Matteo Pellegrini 2, Qin Yan 1, Morgan E Levine 1
Abstract:
...To test this, we serially passaged mouse embryonic fibroblasts (MEFs) and assessed changes in DNAm at each time point via reduced representation bisulfite sequencing. By developing a measure that tracked cellular aging in vitro, we tested whether it tracked physiological aging in various mouse tissues and whether anti-aging interventions modulate this measure. Our measure, termed CultureAGE, was shown to strongly increase with age when examined in multiple tissues (liver, lung, kidney, blood, and adipose). As a control, we confirmed that the measure was not a marker of cellular senescence, suggesting that it reflects a distinct yet progressive cellular aging phenomena that can be induced in vitro. Furthermore, we demonstrated slower epigenetic aging in animals undergoing caloric restriction and a resetting of our measure in lung and kidney fibroblasts when re-programmed to iPSCs. Enrichment and clustering analysis implicated EED and Polycomb group (PcG) factors as potentially important chromatin regulators in translational culture aging phenotypes. Overall, this study supports the concept that physiologically relevant aging changes can be induced in vitro and used to uncover mechanistic insights into epigenetic aging.
PMID: 35104377
Free Full-Text: https://onlinelibrary.wiley.com/doi/10.1111/acel.13553
Tags: biomarkers, epigenetic age, epigenetics, methylation